Package: BOLDconnectR
Title: Retrieve, Transform and Analyze the Barcode of Life Data Systems
        Data
Version: 1.0.3
Authors@R: c(
    person("Sameer", "Padhye", , "spadhye@uoguelph.ca", role = c("aut", "cre")),
    person("Liliana", "Ballesteros-Mejia", , "cballest@uoguelph.ca", role = "aut"),
    person("Timothy", "Agda", , "tagda@uoguelph.ca", role = "aut"),
    person("Jireh", "Agda", , "agdaj@uoguelph.ca", role = "aut"),
    person("Sujeevan", "Ratnasingham", , "sratnasi@uoguelph.ca", role = "aut")
  )
Maintainer: Sameer Padhye <spadhye@uoguelph.ca>
Description: Facilitates retrieval, transformation and analysis of the
        data from the Barcode of Life Data Systems (BOLD) database
        <https://boldsystems.org/>. This package allows both public and
        private user data to be easily downloaded into the R
        environment using a variety of inputs such as: IDs (processid,
        sampleid), BINs, dataset codes, project codes, taxonomy,
        geography etc. It provides frictionless data conversion into
        formats compatible with other R-packages and third-party tools,
        as well as functions for sequence alignment & clustering,
        biodiversity analysis and spatial mapping.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.0.0)
biocViews:
Imports: ape (>= 5.5), BAT (>= 2.0), data.table (>= 1.13), dplyr (>=
        1.0.1), ggplot2 (>= 3.3.2), httr (>= 1.4.2), jsonlite (>= 1.7),
        maps (>= 3.3), methods, rlang, rnaturalearth, sf (>= 0.9.4),
        skimr (>= 2.1.2), tidyr (>= 1.1.1), utils, vegan (>= 2.5.7)
Suggests: Biostrings, BiocManager, DT, msa, muscle, knitr, rmarkdown
VignetteBuilder: knitr
Config/roxygen2/version: 8.1.0
NeedsCompilation: no
Packaged: 2026-09-20 16:51:41 UTC; root
Author: Sameer Padhye [aut, cre], Liliana Ballesteros-Mejia [aut],
        Timothy Agda [aut], Jireh Agda [aut], Sujeevan Ratnasingham
        [aut]
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libglpk-dev libgmp3-dev libicu-dev libxml2-dev libssl-dev
        libproj-dev libsqlite3-dev libudunits2-dev
Repository: https://sameerpadhye.r-universe.dev
Date/Publication: 2026-09-20 12:29:27 UTC
RemoteUrl: https://github.com/cran/BOLDconnectR
RemoteRef: HEAD
RemoteSha: 3e5efdb813e098948de3e725e7d1ec76af7007d3