Package: BOLDconnectR
Title: Retrieve, Transform and Analyze the Barcode of Life Data Systems
        Data
Version: 1.0.0
Authors@R: c(
    person("Sameer", "Padhye", , "spadhye@uoguelph.ca", role = c("aut", "cre")),
    person("Liliana", "Ballesteros-Mejia", , "cballest@uoguelph.ca", role = "aut"),
    person("Sujeevan", "Ratnasingham", , "sratnasi@uoguelph.ca", role = "aut")
  )
Maintainer: Sameer Padhye <spadhye@uoguelph.ca>
Description: Facilitates retrieval, transformation and analysis of the
        data from the Barcode of Life Data Systems (BOLD) database
        <https://boldsystems.org/>. This package allows both public and
        private user data to be easily downloaded into the R
        environment using a variety of inputs such as: IDs (processid,
        sampleid), BINs, dataset codes, project codes, taxonomy,
        geography etc. It provides frictionless data conversion into
        formats compatible with other R-packages and third-party tools,
        as well as functions for sequence alignment & clustering,
        biodiversity analysis and spatial mapping.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.0.0)
biocViews:
Imports: ape(>= 5.5), BAT(>= 2.0), data.table(>= 1.13), dplyr(>=
        1.0.1), ggplot2(>= 3.3.2), httr(>= 1.4.2), jsonlite(>= 1.7),
        maps(>= 3.3), methods, reshape2, rnaturalearth, sf(>= 0.9.4),
        skimr(>= 2.1.2), tidyr(>= 1.1.1), utils, vegan(>= 2.5.7)
Suggests: Biostrings, BiocManager, msa, muscle
RoxygenNote: 7.3.2
NeedsCompilation: no
Packaged: 2026-06-17 09:29:22 UTC; root
Author: Sameer Padhye [aut, cre], Liliana Ballesteros-Mejia [aut],
        Sujeevan Ratnasingham [aut]
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libglpk-dev libgmp3-dev libicu-dev libxml2-dev libssl-dev
        libproj-dev libsqlite3-dev libudunits2-dev
Repository: https://sameerpadhye.r-universe.dev
Date/Publication: 2025-09-17 10:40:07 UTC
RemoteUrl: https://github.com/cran/BOLDconnectR
RemoteRef: HEAD
RemoteSha: 42d7ca921c651d10dbd52db8531bbbc6b722c942